Bioinformatics
The OMICS.si presents bioinformatics studies that use diverse disciplines, including molecular biology, applied informatics and statistics. We are incorporating multiple omics data (genomic, transcriptomic, proteomic, epigenomics etc.) with the purpose to facilitate the understanding of the molecular background of complex phenotypes.
AmiCa is an atlas of miRNA-gene expression in cancer.
We performed an integrative analysis of miRNA-target gene interactions (MTI) on high-throughput molecular profiling of cancer samples obtained from The Cancer Genome Atlas (TCGA). Our study results in correlated MTIs. Our analysis provides a catalogue of MTIs that can serve as a starting point in testing more targeted hypotheses and dealing with cancer functional experiments.
miRNA colorectal cancer is a freely available web application for studying microRNA and mRNA expression and their correlation in colorectal cancer.
